Sequence Similarity Clusters for the Entities in PDB 3ZFE

Entity #1 | Chains: A
VP1 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 8900
95 % 4 25 1114
90 % 4 26 994
70 % 5 32 897
50 % 5 32 941
40 % 27 144 260
30 % 27 144 269
Entity #2 | Chains: B
VP2 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 8984
95 % 4 23 2260
90 % 4 23 2296
70 % 4 29 1731
50 % 26 144 263
40 % 26 144 290
30 % 35 172 158
Entity #3 | Chains: C
VP3 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9008
95 % 4 30 876
90 % 4 30 906
70 % 5 36 824
50 % 10 42 773
40 % 27 151 243
30 % 36 179 147
Entity #4 | Chains: D
VP4 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 4726
95 % 2 12 5331
90 % 2 12 5334
70 % 2 14 4225
50 % 24 114 351
40 % 24 114 384
30 % 24 114 389

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.