Sequence Similarity Clusters for the Entities in PDB 3ZFE

Entity #1 | Chains: A
VP1 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9502
95 % 4 25 1178
90 % 4 26 1057
70 % 5 32 963
50 % 5 32 1009
40 % 27 147 270
30 % 27 147 275
Entity #2 | Chains: B
VP2 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9591
95 % 4 23 2457
90 % 4 23 2506
70 % 4 29 1863
50 % 26 150 286
40 % 26 150 304
30 % 35 178 163
Entity #3 | Chains: C
VP3 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9619
95 % 4 30 943
90 % 4 30 968
70 % 5 36 892
50 % 10 42 832
40 % 27 158 253
30 % 36 188 148
Entity #4 | Chains: D
VP4 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 5040
95 % 2 12 5639
90 % 2 12 5643
70 % 2 14 4460
50 % 24 116 409
40 % 24 116 445
30 % 24 116 439

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.