Sequence Similarity Clusters for the Entities in PDB 3ZFE

Entity #1 | Chains: A
VP1 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9075
95 % 4 25 1141
90 % 4 26 1009
70 % 5 32 915
50 % 5 32 962
40 % 27 146 259
30 % 27 146 270
Entity #2 | Chains: B
VP2 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9164
95 % 4 23 2307
90 % 4 23 2346
70 % 4 29 1770
50 % 26 145 279
40 % 26 145 297
30 % 35 173 161
Entity #3 | Chains: C
VP3 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9188
95 % 4 30 890
90 % 4 30 919
70 % 5 36 837
50 % 10 42 780
40 % 27 153 246
30 % 36 181 146
Entity #4 | Chains: D
VP4 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 4819
95 % 2 12 5419
90 % 2 12 5421
70 % 2 14 4283
50 % 24 115 358
40 % 24 115 392
30 % 24 115 394

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.