Sequence Similarity Clusters for the Entities in PDB 3ZFE

Entity #1 | Chains: A
VP1 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9634
95 % 4 25 1204
90 % 4 26 1084
70 % 5 33 977
50 % 5 33 1019
40 % 27 148 277
30 % 27 148 280
Entity #2 | Chains: B
VP2 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9725
95 % 4 23 2507
90 % 4 23 2556
70 % 4 29 1912
50 % 26 150 293
40 % 26 150 312
30 % 35 178 168
Entity #3 | Chains: C
VP3 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9752
95 % 4 30 977
90 % 4 30 1001
70 % 5 37 902
50 % 10 43 856
40 % 27 159 258
30 % 36 189 151
Entity #4 | Chains: D
VP4 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 5126
95 % 2 12 5734
90 % 2 12 5734
70 % 2 14 4526
50 % 24 116 422
40 % 24 116 459
30 % 24 116 451

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.