Sequence Similarity Clusters for the Entities in PDB 3ZFE

Entity #1 | Chains: A
VP1 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 8968
95 % 4 25 1125
90 % 4 26 1002
70 % 5 32 908
50 % 5 32 952
40 % 27 146 258
30 % 27 146 267
Entity #2 | Chains: B
VP2 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9054
95 % 4 23 2280
90 % 4 23 2316
70 % 4 29 1745
50 % 26 145 269
40 % 26 145 291
30 % 35 173 159
Entity #3 | Chains: C
VP3 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9078
95 % 4 30 882
90 % 4 30 912
70 % 5 36 831
50 % 10 42 776
40 % 27 153 245
30 % 36 181 146
Entity #4 | Chains: D
VP4 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 4753
95 % 2 12 5367
90 % 2 12 5370
70 % 2 14 4250
50 % 24 115 353
40 % 24 115 383
30 % 24 115 388

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.