Sequence Similarity Clusters for the Entities in PDB 3ZFE

Entity #1 | Chains: A
VP1 protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9172
95 % 4 25 1147
90 % 4 26 1023
70 % 5 32 924
50 % 5 32 973
40 % 27 147 262
30 % 27 147 271
Entity #2 | Chains: B
VP2 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9263
95 % 4 23 2328
90 % 4 23 2369
70 % 4 29 1785
50 % 26 146 281
40 % 26 146 299
30 % 35 174 160
Entity #3 | Chains: C
VP3 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 9287
95 % 4 30 896
90 % 4 30 924
70 % 5 36 858
50 % 10 42 795
40 % 27 154 247
30 % 36 183 146
Entity #4 | Chains: D
VP4 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 12 4878
95 % 2 12 5483
90 % 2 12 5486
70 % 2 14 4335
50 % 24 116 359
40 % 24 116 394
30 % 24 116 394

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.