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High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome
Sequence Clustering and Redundancy Reduction Results
3ZEY
Sequence Clusters for the Sequence Entities in PDB 3ZEY
Entity #1: Chains: 0 - 40S RIBOSOMAL PROTEIN S3A, PUTATIVE protein, length: 256 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 43468
95% 1 1 30982
90% 1 1 29789
70% 1 1 26829
50% 1 1 23161
40% 27 27 1633
30% 27 27 1579
Entity #10: Chains: 9 - UBIQUITIN/RIBOSOMAL PROTEIN S27A, PUTATIVE protein, length: 153 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48617
95% 1 1 33818
90% 1 1 32347
70% 1 1 28909
50% 1 1 24913
40% 18 18 2558
30% 18 18 2386
Entity #11: Chains: C - 40S RIBOSOMAL PROTEIN SA, PUTATIVE protein, length: 277 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 42643
95% 1 1 30586
90% 1 1 29417
70% 1 1 26515
50% 1 1 22906
40% 1 1 20313
30% 1 1 17323
Entity #12: Chains: D - 40S RIBOSOMAL PROTEIN S10, PUTATIVE protein, length: 172 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 47302
95% 1 1 33161
90% 1 1 31712
70% 1 1 28351
50% 1 1 24436
40% 1 1 21649
30% 7 7 5595
Entity #13: Chains: E - 40S RIBOSOMAL PROTEINS S11, PUTATIVE protein, length: 174 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 47224
95% 1 1 33112
90% 1 1 31665
70% 1 1 28310
50% 30 32 1321
40% 30 32 1359
30% 30 32 1323
Entity #14: Chains: F - 40S RIBOSOMAL PROTEIN S12 protein, length: 144 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 49224
95% 1 1 34188
90% 1 1 32702
70% 1 1 29223
50% 1 1 25170
40% 1 1 22314
30% 11 11 3767
Entity #15: Chains: G - 40S RIBOSOMAL PROTEIN S13, PUTATIVE protein, length: 151 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48757
95% 1 1 33913
90% 1 1 32433
70% 23 24 1826
50% 30 31 1364
40% 31 33 1308
30% 31 33 1286
Entity #16: Chains: H - 40S RIBOSOMAL PROTEIN S14 protein, length: 144 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 49225
95% 1 1 34189
90% 1 1 32703
70% 30 36 1084
50% 33 40 861
40% 364 403 39
30% 364 403 53
Entity #17: Chains: I - 40S RIBOSOMAL PROTEIN S15, PUTATIVE protein, length: 152 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48692
95% 1 1 33869
90% 1 1 32390
70% 1 1 28946
50% 23 26 1677
40% 23 26 1710
30% 23 26 1656
Entity #18: Chains: J - 40S RIBOSOMAL PROTEIN S15A, PUTATIVE protein, length: 130 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 50329
95% 1 1 34846
90% 1 1 33331
70% 30 34 1179
50% 32 37 1080
40% 32 37 1104
30% 368 408 50
Entity #19: Chains: K - 40S RIBOSOMAL PROTEIN S16, PUTATIVE protein, length: 149 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48937
95% 1 1 33992
90% 1 1 32511
70% 1 1 29055
50% 30 34 1236
40% 31 36 1183
30% 362 399 58
Entity #2: Chains: 1 - 40S RIBOSOMAL PROTEIN S4, PUTATIVE protein, length: 273 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 42794
95% 1 1 30656
90% 1 1 29481
70% 1 1 26571
50% 28 29 1463
40% 28 29 1505
30% 29 31 1360
Entity #20: Chains: L - 40S RIBOSOMAL PROTEIN S17, PUTATIVE protein, length: 142 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 49426
95% 1 1 34282
90% 1 1 32788
70% 1 1 29300
50% 30 31 1367
40% 30 31 1410
30% 30 31 1369
Entity #21: Chains: M - 40S RIBOSOMAL PROTEIN S18, PUTATIVE protein, length: 153 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48618
95% 1 1 33819
90% 1 1 32348
70% 1 1 28910
50% 30 34 1235
40% 31 36 1181
30% 362 401 55
Entity #22: Chains: O - RIBOSOMAL PROTEIN S19, PUTATIVE protein, length: 167 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 47503
95% 1 1 33302
90% 1 1 31846
70% 1 1 28469
50% 1 1 24537
40% 1 1 21736
30% 1 1 18527
Entity #23: Chains: P - 40S RIBOSOMAL PROTEIN S2, PUTATIVE protein, length: 266 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 42990
95% 1 1 30765
90% 1 1 29585
70% 1 1 26661
50% 21 22 2032
40% 21 22 2053
30% 21 22 1949
Entity #24: Chains: Q - RIBOSOMAL PROTEIN S20, PUTATIVE protein, length: 117 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 51398
95% 1 1 35587
90% 1 1 34036
70% 1 1 30383
50% 1 1 26171
40% 28 30 1475
30% 28 30 1420
Entity #25: Chains: R - 40S RIBOSOMAL PROTEIN S21, PUTATIVE protein, length: 194 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 46379
95% 1 1 32577
90% 1 1 31165
70% 1 1 27878
50% 1 1 24034
40% 1 1 21293
30% 1 1 18138
Entity #26: Chains: S - 40S RIBOSOMAL PROTEIN S23, PUTATIVE protein, length: 143 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 49320
95% 1 1 34232
90% 1 1 32745
70% 32 38 1011
50% 33 40 1024
40% 33 40 1052
30% 33 40 1029
Entity #27: Chains: T - 40S RIBOSOMAL PROTEIN S24 protein, length: 137 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 49747
95% 1 1 34520
90% 1 1 33018
70% 1 1 29498
50% 22 24 1889
40% 22 24 1898
30% 22 24 1820
Entity #28: Chains: U - 40S RIBOSOMAL PROTEIN S25, PUTATIVE protein, length: 113 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 51736
95% 1 1 35846
90% 1 1 34287
70% 1 1 30608
50% 1 1 26373
40% 23 24 1908
30% 23 24 1827
Entity #29: Chains: V - RIBOSOMAL PROTEIN S26, PUTATIVE protein, length: 111 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 51903
95% 1 1 35980
90% 1 1 34413
70% 1 1 30715
50% 21 21 2156
40% 27 27 1649
30% 27 27 1597
Entity #3: Chains: 2 - 40S RIBOSOMAL PROTEIN S5, PUTATIVE protein, length: 190 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 46562
95% 1 1 32704
90% 1 1 31280
70% 1 1 27980
50% 30 35 1175
40% 32 38 1097
30% 32 38 1076
Entity #30: Chains: W - 40S RIBOSOMAL PROTEIN S27, PUTATIVE protein, length: 86 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 53948
95% 1 1 37545
90% 1 1 35923
70% 1 1 32080
50% 28 29 1483
40% 28 29 1524
30% 28 29 1470
Entity #31: Chains: X - 40S RIBOSOMAL PROTEIN S3, PUTATIVE protein, length: 214 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 45490
95% 1 1 32057
90% 1 1 30713
70% 1 1 27507
50% 25 27 1603
40% 31 33 1300
30% 31 34 1242
Entity #32: Chains: Y - 40S RIBOSOMAL PROTEIN S30, PUTATIVE protein, length: 66 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 55222
95% 1 1 38592
90% 1 1 36939
70% 1 1 33011
50% 15 17 2765
40% 15 17 2710
30% 15 17 2522
Entity #33: Chains: Z - 40S RIBOSOMAL PROTEIN S33, PUTATIVE protein, length: 103 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 52658
95% 1 1 36515
90% 1 1 34930
70% 1 1 31173
50% 1 1 26877
40% 1 1 23803
30% 1 1 20181
Entity #4: Chains: 3 - 40S RIBOSOMAL PROTEIN S6 protein, length: 250 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 43661
95% 1 1 31083
90% 1 1 29888
70% 1 1 26913
50% 21 22 2039
40% 21 22 2061
30% 21 22 1954
Entity #5: Chains: 4 - RIBOSOMAL PROTEIN S7, PUTATIVE protein, length: 202 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 46073
95% 1 1 32371
90% 1 1 30981
70% 1 1 27724
50% 1 1 23903
40% 1 1 21173
30% 28 28 1517
Entity #6: Chains: 5 - 40S RIBOSOMAL PROTEIN S8 protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 44931
95% 1 1 31777
90% 1 1 30504
70% 1 1 27380
50% 28 28 1535
40% 28 28 1566
30% 28 28 1512
Entity #7: Chains: 6 - 40S RIBOSOMAL PROTEIN S9, PUTATIVE protein, length: 190 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 46563
95% 1 1 32705
90% 1 1 31281
70% 1 1 27981
50% 30 32 1317
40% 31 34 1263
30% 31 34 1248
Entity #8: Chains: 7 - GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT-LIKE PROTEIN protein, length: 318 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 41406
95% 1 1 29987
90% 1 1 28841
70% 1 1 26004
50% 26 30 1038
40% 32 36 901
30% 32 36 888
Entity #9: Chains: 8 - RIBOSOMAL PROTEIN S29, PUTATIVE protein, length: 57 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 55697
95% 1 1 38955
90% 1 1 37284
70% 1 1 33308
50% 30 33 1279
40% 30 33 1316
30% 30 33 1293
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.