Sequence Similarity Clusters for the Entities in PDB 3ZEF

Entity #1 | Chains: A,D
A1 CISTRON-SPLICING FACTOR AAR2 protein, length: 355 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 15263
95 % 6 7 7855 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 2.1
PDBFlex
90 % 6 7 7799
70 % 6 7 7584
50 % 6 7 6987
40 % 6 7 6499
30 % 6 7 5816
Entity #2 | Chains: B,E
PRE-MRNA-SPLICING FACTOR 8 protein, length: 1531 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31399
95 % 2 2 21945 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.9
PDBFlex
90 % 2 2 21299
70 % 2 2 19538
50 % 2 2 16966
40 % 2 2 15134
30 % 2 2 12981

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures