Sequence Similarity Clusters for the Entities in PDB 3ZEF

Entity #1 | Chains: A,D
A1 CISTRON-SPLICING FACTOR AAR2 protein, length: 355 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 14671
95 % 6 7 7579 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 2.1
PDBFlex
90 % 6 7 7527
70 % 6 7 7333
50 % 6 7 6752
40 % 6 7 6283
30 % 6 7 5621
Entity #2 | Chains: B,E
PRE-MRNA-SPLICING FACTOR 8 protein, length: 1531 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30346
95 % 2 2 21193 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.9
PDBFlex
90 % 2 2 20604
70 % 2 2 18897
50 % 2 2 16441
40 % 2 2 14687
30 % 2 2 12601

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.