Sequence Similarity Clusters for the Entities in PDB 3ZED

Entity #1 | Chains: A,B,C
RNA-DIRECTED RNA POLYMERASE protein, length: 853 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 1544
95 % 2 5 2064
90 % 2 5 2119
70 % 2 5 2134
50 % 2 5 2150
40 % 2 10 1810
30 % 2 10 1744
Entity #2 | Chains: D,E,F
CAPSID PROTEIN VP3 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 24494
95 % 1 1 20478
90 % 1 1 19889
70 % 1 1 18355
50 % 1 1 15989
40 % 1 1 14291
30 % 1 1 12223

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.