Sequence Similarity Clusters for the Entities in PDB 3ZED

Entity #1 | Chains: A,B,C
RNA-DIRECTED RNA POLYMERASE protein, length: 853 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 1526
95 % 2 5 2046
90 % 2 5 2100
70 % 2 5 2113
50 % 2 5 2128
40 % 2 10 1790
30 % 2 10 1728
Entity #2 | Chains: D,E,F
CAPSID PROTEIN VP3 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 24246
95 % 1 1 20290
90 % 1 1 19707
70 % 1 1 18183
50 % 1 1 15853
40 % 1 1 14177
30 % 1 1 12125

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.