Sequence Similarity Clusters for the Entities in PDB 3ZED

Entity #1 | Chains: A,B,C
RNA-DIRECTED RNA POLYMERASE protein, length: 853 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 5 1470
95 % 2 5 1982
90 % 2 5 2028
70 % 2 5 2046
50 % 2 5 2065
40 % 2 10 1745
30 % 2 10 1672
Entity #2 | Chains: D,E,F
CAPSID PROTEIN VP3 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 23502
95 % 1 1 19719
90 % 1 1 19168
70 % 1 1 17677
50 % 1 1 15432
40 % 1 1 13819
30 % 1 1 11841

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.