Sequence Similarity Clusters for the Entities in PDB 3ZDL

Entity #1 | Chains: A
VINCULIN protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 10 6561
95 % 7 24 2357 Flexibility: Low
Max RMSD: 6.0, Avg RMSD: 2.4
PDBFlex
90 % 7 24 2423
70 % 7 24 2429
50 % 7 24 2409
40 % 7 24 2377
30 % 7 24 2263
Entity #2 | Chains: B
AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B MEMBER 1-INTERACTING PROTEIN protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 76727
95 % 1 1 53419
90 % 1 1 50615
70 % 1 1 44272
50 % 1 1 37736
40 % 1 1 33258
30 % 1 1 28191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures