Sequence Similarity Clusters for the Entities in PDB 3ZDL

Entity #1 | Chains: A
VINCULIN protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 10 6451
95 % 7 23 2390 Flexibility: Low
Max RMSD: 6.0, Avg RMSD: 2.4
PDBFlex
90 % 7 23 2455
70 % 7 23 2458
50 % 7 23 2440
40 % 7 23 2413
30 % 7 23 2301
Entity #2 | Chains: B
AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B MEMBER 1-INTERACTING PROTEIN protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75779
95 % 1 1 52768
90 % 1 1 50021
70 % 1 1 43768
50 % 1 1 37311
40 % 1 1 32879
30 % 1 1 27867

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures