Sequence Similarity Clusters for the Entities in PDB 3ZDL

Entity #1 | Chains: A
VINCULIN protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 10 6305
95 % 7 23 2318 Flexibility: Low
Max RMSD: 6.0, Avg RMSD: 2.4
PDBFlex
90 % 7 23 2381
70 % 7 23 2376
50 % 7 23 2355
40 % 7 23 2339
30 % 7 23 2242
Entity #2 | Chains: B
AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B MEMBER 1-INTERACTING PROTEIN protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74400
95 % 1 1 51905
90 % 1 1 49248
70 % 1 1 43122
50 % 1 1 36781
40 % 1 1 32426
30 % 1 1 27495

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.