Sequence Similarity Clusters for the Entities in PDB 3ZDL

Entity #1 | Chains: A
VINCULIN protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 10 6110
95 % 7 23 2252 Flexibility: Low
Max RMSD: 6.0, Avg RMSD: 2.3
PDBFlex
90 % 7 23 2318
70 % 7 23 2316
50 % 7 23 2296
40 % 7 23 2281
30 % 7 23 2194
Entity #2 | Chains: B
AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B MEMBER 1-INTERACTING PROTEIN protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72327
95 % 1 1 50419
90 % 1 1 47882
70 % 1 1 42076
50 % 1 1 35980
40 % 1 1 31732
30 % 1 1 26896

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.