Sequence Similarity Clusters for the Entities in PDB 3ZDL

Entity #1 | Chains: A
VINCULIN protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 11 6664
95 % 7 25 2300 Flexibility: Low
Max RMSD: 6.0, Avg RMSD: 2.2
PDBFlex
90 % 7 25 2364
70 % 7 25 2360
50 % 7 25 2335
40 % 7 25 2315
30 % 7 25 2173
Entity #2 | Chains: B
AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B MEMBER 1-INTERACTING PROTEIN protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51614
95 % 1 1 42606
90 % 1 1 40576
70 % 1 1 35822
50 % 1 1 30416
40 % 1 1 26641
30 % 1 1 22232

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures