Sequence Similarity Clusters for the Entities in PDB 3ZD7

Entity #1 | Chains: A
PROBABLE ATP-DEPENDENT RNA HELICASE DDX58 protein, length: 696 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51953
95 % 4 9 2491 Flexibility: Low
Max RMSD: 8.6, Avg RMSD: 2.8
PDBFlex
90 % 4 9 2553
70 % 4 9 2544
50 % 4 9 2533
40 % 4 9 2494
30 % 7 18 1506
Entity #2 | Chains: C,D
RNA DUPLEX rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures