Sequence Similarity Clusters for the Entities in PDB 3ZD6

Entity #1 | Chains: A
PROBABLE ATP-DEPENDENT RNA HELICASE DDX58 protein, length: 696 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49247
95 % 7 9 2334 Flexibility: Low
Max RMSD: 8.6, Avg RMSD: 2.8
PDBFlex
90 % 7 9 2398
70 % 7 9 2383
50 % 7 9 2376
40 % 7 9 2355
30 % 10 18 1436
Entity #2 | Chains: C,D
RNA DUPLEX rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.