Sequence Similarity Clusters for the Entities in PDB 3ZD6

Entity #1 | Chains: A
PROBABLE ATP-DEPENDENT RNA HELICASE DDX58 protein, length: 696 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49865
95 % 8 10 2568 Flexibility: Low
Max RMSD: 8.6, Avg RMSD: 2.7
PDBFlex
90 % 8 10 2640
70 % 8 10 2630
50 % 8 10 2616
40 % 8 10 2571
30 % 11 19 1554
Entity #2 | Chains: C,D
RNA DUPLEX rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures