Sequence Similarity Clusters for the Entities in PDB 3WQY

Entity #1 | Chains: A,B
Alanine--tRNA ligase protein, length: 906 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 16393
95 % 1 2 15334 Flexibility: Medium
Max RMSD: 7.8, Avg RMSD: 5.4
PDBFlex
90 % 1 2 15054
70 % 1 2 14140
50 % 1 2 12543
40 % 1 2 11370
30 % 1 2 9891
Entity #2 | Chains: C
RNA (75-MER) rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures