Sequence Similarity Clusters for the Entities in PDB 3WQY

Entity #1 | Chains: A,B
Alanine--tRNA ligase protein, length: 906 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 24762
95 % 1 2 21962 Flexibility: Medium
Max RMSD: 7.8, Avg RMSD: 5.4
PDBFlex
90 % 1 2 21289
70 % 1 2 19000
50 % 1 2 16446
40 % 1 2 14551
30 % 1 2 12216
Entity #2 | Chains: C
RNA (75-MER) rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures