Sequence Similarity Clusters for the Entities in PDB 3WFR

Entity #1 | Chains: A,B
RNA (74-MER) rna, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C,D
RNA (75-MER) rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: E,F,G,H
Poly A polymerase protein, length: 512 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 16788
95 % 2 4 3340
90 % 2 4 3389
70 % 2 4 3352
50 % 2 4 3275
40 % 2 4 3185
30 % 2 4 2994

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.