Sequence Similarity Clusters for the Entities in PDB 3WBM

Entity #1 | Chains: A,B,C,D
DNA/RNA-binding protein Alba 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 7769
95 % 2 5 6728 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.9
PDBFlex
90 % 2 5 6718
70 % 2 5 6543
50 % 3 11 2513
40 % 3 11 2475
30 % 5 14 1911
Entity #2 | Chains: X,Y
RNA (25-MER) rna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures