Sequence Similarity Clusters for the Entities in PDB 3WBM

Entity #1 | Chains: A,B,C,D
DNA/RNA-binding protein Alba 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 7637
95 % 2 5 6627 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.9
PDBFlex
90 % 2 5 6608
70 % 2 5 6443
50 % 3 11 2478
40 % 3 11 2447
30 % 5 14 1883
Entity #2 | Chains: X,Y
RNA (25-MER) rna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures