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Crystal Structure of Human Nucleosome Core Particle lacking H4 N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W99
Sequence Clusters for the Sequence Entities in PDB 3W99
Entity #1: Chains: A,E - Histone H3.1 protein, length: 139 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 13 15 929
95% 83 95 82
90% 86 98 85
70% 86 98 105
50% 87 100 139
40% 87 100 168
30% 87 100 191
Entity #2: Chains: B,F - Histone H4 protein, length: 91 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 8 2551
95% 6 9 3002
90% 7 10 2737
70% 7 10 2754
50% 7 10 2771
40% 7 10 2713
30% 7 10 2528
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 17 22 546
95% 69 84 86
90% 72 90 91
70% 75 93 106
50% 81 99 131
40% 81 99 159
30% 81 99 183
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 17 21 583
95% 71 84 88
90% 73 86 96
70% 79 92 109
50% 79 92 146
40% 79 92 174
30% 79 92 196
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.