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Crystal Structure of Human Nucleosome Core Particle lacking H4 N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W99
Sequence Clusters for the Sequence Entities in PDB 3W99
Entity #1: Chains: A,E - Histone H3.1 protein, length: 139 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 13 15 1017
95% 84 96 82
90% 87 99 84
70% 87 99 103
50% 88 101 138
40% 88 101 167
30% 88 101 192
Entity #2: Chains: B,F - Histone H4 protein, length: 91 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 5 8 2661
95% 6 9 3114
90% 7 10 2839
70% 7 10 2845
50% 7 10 2826
40% 7 10 2760
30% 7 10 2572
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 17 22 616
95% 70 85 87
90% 73 91 91
70% 76 94 104
50% 82 100 130
40% 82 100 158
30% 82 100 184
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 17 21 663
95% 72 85 89
90% 74 87 96
70% 80 93 111
50% 80 93 152
40% 80 93 176
30% 80 93 198
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.