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Crystal Structure of Human Nucleosome Core Particle lacking H3.1 N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W98
Sequence Clusters for the Sequence Entities in PDB 3W98
Entity #1: Chains: A,E - Histone H3.1 protein, length: 112 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 34581
95% 2 2 15112
90% 2 2 14744
70% 2 2 13692
50% 2 2 12003
40% 2 2 10763
30% 2 2 9313
Entity #2: Chains: B,F - Histone H4 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 76 82 57
95% 91 97 79
90% 95 101 80
70% 95 101 100
50% 95 101 134
40% 95 101 163
30% 95 101 187
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 21 22 546
95% 77 84 86
90% 82 90 91
70% 85 93 106
50% 91 99 131
40% 91 99 159
30% 91 99 183
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 21 583
95% 78 84 88
90% 80 86 95
70% 86 92 109
50% 86 92 146
40% 86 92 174
30% 86 92 196
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.