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Crystal Structure of Human Nucleosome Core Particle lacking H3.1 N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W98
Sequence Clusters for the Sequence Entities in PDB 3W98
Entity #1: Chains: A,E - Histone H3.1 protein, length: 112 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 37879
95% 3 4 7900
90% 3 4 7825
70% 3 4 7476
50% 3 4 6830
40% 3 4 6298
30% 3 4 5600
Entity #2: Chains: B,F - Histone H4 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 83 90 96
95% 100 107 118
90% 104 111 114
70% 104 111 129
50% 104 111 155
40% 104 111 173
30% 104 111 187
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 22 23 622
95% 79 86 138
90% 85 93 134
70% 88 96 149
50% 94 102 167
40% 94 102 184
30% 94 102 200
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 21 22 686
95% 80 86 139
90% 82 88 148
70% 89 95 154
50% 89 95 187
40% 89 95 203
30% 89 95 219
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.