POP-OUT | CLOSE
 
Crystal Structure of Human Nucleosome Core Particle lacking H3.1 N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W98
Sequence Clusters for the Sequence Entities in PDB 3W98
Entity #1: Chains: A,E - Histone H3.1 protein, length: 112 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 34475
95% 2 2 15058
90% 2 2 14694
70% 2 2 13651
50% 2 2 11970
40% 2 2 10737
30% 2 2 9290
Entity #2: Chains: B,F - Histone H4 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 76 82 57
95% 91 97 78
90% 95 101 79
70% 95 101 100
50% 95 101 134
40% 95 101 163
30% 95 101 187
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 21 22 544
95% 77 84 86
90% 82 90 90
70% 85 93 105
50% 91 99 131
40% 91 99 159
30% 91 99 183
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 21 581
95% 78 84 88
90% 80 86 95
70% 86 92 108
50% 86 92 144
40% 86 92 173
30% 86 92 195
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.