POP-OUT | CLOSE
 
Crystal Structure of Human Nucleosome Core Particle lacking H3.1 N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W98
Sequence Clusters for the Sequence Entities in PDB 3W98
Entity #1: Chains: A,E - Histone H3.1 protein, length: 112 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 34998
95% 2 2 15278
90% 2 2 14903
70% 2 2 13831
50% 2 2 12120
40% 2 2 10873
30% 2 2 9391
Entity #2: Chains: B,F - Histone H4 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 76 82 72
95% 91 97 80
90% 95 101 80
70% 95 101 100
50% 95 101 134
40% 95 101 163
30% 95 101 188
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 21 22 560
95% 77 84 88
90% 82 90 91
70% 85 93 107
50% 91 99 131
40% 91 99 160
30% 91 99 184
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 21 604
95% 78 84 90
90% 80 86 97
70% 86 92 113
50% 86 92 152
40% 86 92 176
30% 86 92 199
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.