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Crystal Structure of Human Nucleosome Core Particle lacking H3.1 N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W98
Sequence Clusters for the Sequence Entities in PDB 3W98
Entity #1: Chains: A,E - Histone H3.1 protein, length: 112 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 36682
95% 2 2 15891
90% 2 2 15498
70% 2 2 14409
50% 2 2 12623
40% 2 2 11327
30% 2 2 9762
Entity #2: Chains: B,F - Histone H4 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 78 84 92
95% 94 100 96
90% 98 104 97
70% 98 104 115
50% 98 104 153
40% 98 104 176
30% 98 104 194
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 22 23 597
95% 79 86 129
90% 84 92 107
70% 87 95 124
50% 93 101 150
40% 93 101 174
30% 93 101 191
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 21 22 662
95% 80 86 131
90% 82 88 137
70% 88 94 128
50% 88 94 173
40% 88 94 194
30% 88 94 209
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.