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Crystal Structure of Human Nucleosome Core Particle lacking H2B N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W97
Sequence Clusters for the Sequence Entities in PDB 3W97
Entity #1: Chains: A,E - Histone H3.1 protein, length: 139 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 16 16 866
95% 94 100 123
90% 97 103 127
70% 97 103 144
50% 99 106 166
40% 99 106 183
30% 99 106 199
Entity #2: Chains: B,F - Histone H4 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 81 90 96
95% 98 107 118
90% 102 111 114
70% 102 111 129
50% 102 111 155
40% 102 111 173
30% 102 111 187
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 21 23 622
95% 77 86 138
90% 83 93 134
70% 86 96 149
50% 92 102 167
40% 92 102 184
30% 92 102 200
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 105 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 23829
95% 5 7 3067
90% 5 7 3111
70% 5 7 3108
50% 5 7 3024
40% 5 7 2938
30% 5 7 2750
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.