Sequence Similarity Clusters for the Entities in PDB 3W97

Entity #1 | Chains: A,E
Histone H3.1 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 31 365
95 % 115 123 104
90 % 118 126 90
70 % 118 126 108
50 % 120 129 145
40 % 120 129 158
30 % 120 129 177
Entity #2 | Chains: B,F
Histone H4 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 101 112 85
95 % 119 130 78
90 % 124 135 76
70 % 124 135 92
50 % 124 135 131
40 % 124 135 149
30 % 124 135 166
Entity #3 | Chains: C,G
Histone H2A type 1-B/E protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 35 39 284
95 % 99 110 115
90 % 107 119 109
70 % 111 123 102
50 % 117 129 134
40 % 117 129 150
30 % 117 129 167
Entity #4 | Chains: D,H
Histone H2B type 1-J protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24897
95 % 8 10 2195
90 % 8 10 2235
70 % 9 11 1853
50 % 9 11 1878
40 % 9 11 1894
30 % 9 11 1800
Entity #5 | Chains: I,J
146-mer DNA dna, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.