Sequence Similarity Clusters for the Entities in PDB 3W97

Entity #1 | Chains: A,E
Histone H3.1 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 40 323
95 % 132 143 90
90 % 135 146 83
70 % 136 147 101
50 % 138 150 136
40 % 138 150 152
30 % 138 150 169
Entity #2 | Chains: B,F
Histone H4 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 120 134 78
95 % 139 153 72
90 % 144 158 73
70 % 144 158 88
50 % 144 158 127
40 % 144 158 142
30 % 144 158 158
Entity #3 | Chains: C,G
Histone H2A type 1-B/E protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 45 50 254
95 % 113 129 112
90 % 123 140 84
70 % 129 146 93
50 % 139 156 121
40 % 139 156 139
30 % 139 156 155
Entity #4 | Chains: D,H
Histone H2B type 1-J protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 10110
95 % 9 12 1562
90 % 9 12 1594
70 % 10 13 1407
50 % 10 13 1464
40 % 10 13 1485
30 % 10 13 1463
Entity #5 | Chains: I,J
146-mer DNA dna, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.