Sequence Similarity Clusters for the Entities in PDB 3W97

Entity #1 | Chains: A,E
Histone H3.1 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 39 330
95 % 131 142 98
90 % 134 145 83
70 % 135 146 101
50 % 137 149 133
40 % 137 149 151
30 % 137 149 168
Entity #2 | Chains: B,F
Histone H4 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 119 133 81
95 % 138 152 71
90 % 143 157 73
70 % 143 157 86
50 % 143 157 124
40 % 143 157 141
30 % 143 157 157
Entity #3 | Chains: C,G
Histone H2A type 1-B/E protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 49 251
95 % 112 128 109
90 % 122 139 87
70 % 128 145 93
50 % 138 155 119
40 % 138 155 139
30 % 138 155 154
Entity #4 | Chains: D,H
Histone H2B type 1-J protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 10024
95 % 9 12 1539
90 % 9 12 1572
70 % 10 13 1390
50 % 10 13 1449
40 % 10 13 1472
30 % 10 13 1448
Entity #5 | Chains: I,J
146-mer DNA dna, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.