Sequence Similarity Clusters for the Entities in PDB 3W97

Entity #1 | Chains: A,E
Histone H3.1 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 32 352
95 % 116 126 103
90 % 119 129 103
70 % 120 130 116
50 % 122 133 142
40 % 122 133 156
30 % 122 133 175
Entity #2 | Chains: B,F
Histone H4 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 104 117 85
95 % 122 135 78
90 % 127 140 78
70 % 127 140 92
50 % 127 140 130
40 % 127 140 144
30 % 127 140 163
Entity #3 | Chains: C,G
Histone H2A type 1-B/E protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 41 276
95 % 101 114 112
90 % 109 123 106
70 % 113 127 106
50 % 120 134 129
40 % 120 134 143
30 % 120 134 162
Entity #4 | Chains: D,H
Histone H2B type 1-J protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 9167
95 % 9 11 1823
90 % 9 11 1869
70 % 10 12 1583
50 % 10 12 1626
40 % 10 12 1660
30 % 10 12 1601
Entity #5 | Chains: I,J
146-mer DNA dna, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.