Sequence Similarity Clusters for the Entities in PDB 3W97

Entity #1 | Chains: A,E
Histone H3.1 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 41 301
95 % 135 149 76
90 % 138 152 78
70 % 139 153 96
50 % 141 156 131
40 % 141 156 145
30 % 141 156 160
Entity #2 | Chains: B,F
Histone H4 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 123 140 75
95 % 142 159 73
90 % 147 164 74
70 % 147 164 87
50 % 147 164 122
40 % 147 164 139
30 % 147 164 155
Entity #3 | Chains: C,G
Histone H2A type 1-B/E protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 48 53 245
95 % 119 139 86
90 % 127 147 80
70 % 133 153 88
50 % 143 163 117
40 % 143 163 138
30 % 143 163 150
Entity #4 | Chains: D,H
Histone H2B type 1-J protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 10290
95 % 11 14 1486
90 % 11 14 1512
70 % 12 15 1359
50 % 12 15 1414
40 % 12 15 1425
30 % 12 15 1400
Entity #5 | Chains: I,J
146-mer DNA dna, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.