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Crystal Structure of Human Nucleosome Core Particle lacking H2B N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W97
Sequence Clusters for the Sequence Entities in PDB 3W97
Entity #1: Chains: A,E - Histone H3.1 protein, length: 139 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 15 15 1080
95% 93 99 124
90% 96 102 131
70% 96 102 148
50% 98 105 172
40% 98 105 189
30% 98 105 206
Entity #2: Chains: B,F - Histone H4 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 80 89 97
95% 97 106 120
90% 101 110 119
70% 101 110 132
50% 101 110 160
40% 101 110 180
30% 101 110 193
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 21 23 614
95% 77 86 136
90% 83 93 132
70% 86 96 149
50% 92 102 166
40% 92 102 183
30% 92 102 198
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 105 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 23539
95% 5 7 2991
90% 5 7 3035
70% 5 7 3046
50% 5 7 2998
40% 5 7 2914
30% 5 7 2725
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.