Sequence Similarity Clusters for the Entities in PDB 3W97

Entity #1 | Chains: A,E
Histone H3.1 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 42 311
95 % 136 151 76
90 % 139 154 78
70 % 140 155 93
50 % 142 158 128
40 % 142 158 145
30 % 142 158 160
Entity #2 | Chains: B,F
Histone H4 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 124 142 62
95 % 143 161 74
90 % 148 166 73
70 % 148 166 86
50 % 148 166 122
40 % 148 166 140
30 % 148 166 154
Entity #3 | Chains: C,G
Histone H2A type 1-B/E protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 49 54 252
95 % 120 141 81
90 % 128 149 79
70 % 134 155 89
50 % 144 165 116
40 % 144 165 138
30 % 144 165 150
Entity #4 | Chains: D,H
Histone H2B type 1-J protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 10628
95 % 11 14 1551
90 % 11 14 1578
70 % 12 15 1397
50 % 12 15 1450
40 % 12 15 1464
30 % 12 15 1440
Entity #5 | Chains: I,J
146-mer DNA dna, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.