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Crystal Structure of Human Nucleosome Core Particle lacking H2A N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W96
Sequence Clusters for the Sequence Entities in PDB 3W96
Entity #1: Chains: A,E - Histone H3.1 protein, length: 139 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 14 16 866
95% 90 102 121
90% 93 105 126
70% 93 105 141
50% 95 108 163
40% 95 108 183
30% 95 108 197
Entity #2: Chains: B,F - Histone H4 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 78 92 95
95% 93 109 113
90% 97 113 97
70% 97 113 117
50% 97 113 152
40% 97 113 169
30% 97 113 186
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 23 623
95% 75 88 136
90% 78 95 132
70% 81 98 146
50% 87 104 164
40% 87 104 184
30% 87 104 198
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 22 687
95% 77 88 137
90% 79 90 146
70% 85 97 153
50% 85 97 182
40% 85 97 197
30% 85 97 215
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.