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Crystal Structure of Human Nucleosome Core Particle lacking H2A N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W96
Sequence Clusters for the Sequence Entities in PDB 3W96
Entity #1: Chains: A,E - Histone H3.1 protein, length: 139 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 14 15 1017
95% 86 96 82
90% 89 99 84
70% 89 99 103
50% 90 101 138
40% 90 101 167
30% 90 101 192
Entity #2: Chains: B,F - Histone H4 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 72 83 70
95% 86 98 80
90% 90 102 80
70% 90 102 98
50% 90 102 133
40% 90 102 161
30% 90 102 187
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 19 22 616
95% 72 85 87
90% 75 91 91
70% 78 94 104
50% 84 100 130
40% 84 100 158
30% 84 100 184
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 19 21 663
95% 74 85 89
90% 76 87 96
70% 82 93 111
50% 82 93 152
40% 82 93 176
30% 82 93 198
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.