Sequence Similarity Clusters for the Entities in PDB 3W96

Entity #1 | Chains: A,E
Histone H3.1 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 34 40 327
95 % 124 147 80
90 % 127 150 79
70 % 128 151 98
50 % 130 154 134
40 % 130 154 149
30 % 130 154 165
Entity #2 | Chains: B,F
Histone H4 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 113 138 77
95 % 130 157 73
90 % 135 162 73
70 % 135 162 87
50 % 135 162 123
40 % 135 162 140
30 % 135 162 156
Entity #3 | Chains: C,G
Histone H2A type 1-B/E protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 52 251
95 % 108 133 110
90 % 115 144 83
70 % 121 150 93
50 % 131 160 120
40 % 131 160 138
30 % 131 160 153
Entity #4 | Chains: D,H
Histone H2B type 1-J protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 46 271
95 % 110 132 113
90 % 115 137 111
70 % 121 144 106
50 % 121 144 143
40 % 121 144 159
30 % 121 144 178
Entity #5 | Chains: I,J
146-mer DNA dna, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.