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Crystal Structure of Human Nucleosome Core Particle lacking H2A N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W96
Sequence Clusters for the Sequence Entities in PDB 3W96
Entity #1: Chains: A,E - Histone H3.1 protein, length: 139 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 14 15 1000
95% 85 95 82
90% 88 98 86
70% 88 98 106
50% 89 100 140
40% 89 100 168
30% 89 100 192
Entity #2: Chains: B,F - Histone H4 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 71 82 72
95% 85 97 80
90% 89 101 80
70% 89 101 100
50% 89 101 134
40% 89 101 163
30% 89 101 188
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 19 22 560
95% 71 84 88
90% 74 90 91
70% 77 93 107
50% 83 99 131
40% 83 99 160
30% 83 99 184
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 19 21 604
95% 73 84 90
90% 75 86 97
70% 81 92 113
50% 81 92 152
40% 81 92 176
30% 81 92 199
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.