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Crystal Structure of Human Nucleosome Core Particle lacking H2A N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W96
Sequence Clusters for the Sequence Entities in PDB 3W96
Entity #1: Chains: A,E - Histone H3.1 protein, length: 139 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 14 15 1074
95% 88 98 124
90% 91 101 131
70% 91 101 148
50% 93 104 174
40% 93 104 192
30% 93 104 208
Entity #2: Chains: B,F - Histone H4 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 76 87 101
95% 91 103 122
90% 95 107 124
70% 95 107 139
50% 95 107 164
40% 95 107 181
30% 95 107 197
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 23 606
95% 73 86 135
90% 76 92 133
70% 79 95 149
50% 85 101 165
40% 85 101 182
30% 85 101 199
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 22 673
95% 75 86 136
90% 77 88 145
70% 83 94 153
50% 83 94 186
40% 83 94 202
30% 83 94 217
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.