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Crystal Structure of Human Nucleosome Core Particle lacking H2A N-terminal region
Sequence Clustering and Redundancy Reduction Results
3W96
Sequence Clusters for the Sequence Entities in PDB 3W96
Entity #1: Chains: A,E - Histone H3.1 protein, length: 139 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 14 15 1056
95% 88 98 98
90% 91 101 104
70% 91 101 123
50% 93 104 159
40% 93 104 181
30% 93 104 199
Entity #2: Chains: B,F - Histone H4 protein, length: 106 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 73 84 92
95% 88 100 96
90% 92 104 97
70% 92 104 115
50% 92 104 153
40% 92 104 176
30% 92 104 194
Entity #3: Chains: C,G - Histone H2A type 1-B/E protein, length: 124 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 23 597
95% 73 86 129
90% 76 92 107
70% 79 95 124
50% 85 101 150
40% 85 101 174
30% 85 101 191
Entity #4: Chains: D,H - Histone H2B type 1-J protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 20 22 662
95% 75 86 131
90% 77 88 137
70% 83 94 128
50% 83 94 173
40% 83 94 194
30% 83 94 209
Entity #5: Chains: I,J - 146-mer DNA dna, length: 146 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.