Sequence Similarity Clusters for the Entities in PDB 3W96

Entity #1 | Chains: A,E
Histone H3.1 protein, length: 139 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 35 394
95 % 116 137 105
90 % 119 140 105
70 % 120 141 116
50 % 122 144 140
40 % 122 144 157
30 % 122 144 173
Entity #2 | Chains: B,F
Histone H4 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 105 128 86
95 % 122 147 78
90 % 127 152 74
70 % 127 152 91
50 % 127 152 128
40 % 127 152 147
30 % 127 152 160
Entity #3 | Chains: C,G
Histone H2A type 1-B/E protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 47 258
95 % 102 125 112
90 % 107 134 107
70 % 113 140 99
50 % 123 150 124
40 % 123 150 142
30 % 123 150 155
Entity #4 | Chains: D,H
Histone H2B type 1-J protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 37 43 282
95 % 104 124 116
90 % 107 127 118
70 % 113 134 124
50 % 113 134 154
40 % 113 134 170
30 % 113 134 186
Entity #5 | Chains: I,J
146-mer DNA dna, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.