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An Information Portal to 105025 Biological Macromolecular Structures

Crystal structure of the DNA-binding domain of AdpA, the global transcriptional factor, in complex with a target DNA
Sequence Clustering and Redundancy Reduction Results
3W6V
Sequence Clusters for the Sequence Entities in PDB 3W6V
Entity #1: Chains: A - AdpA protein, length: 147 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 50154
95% 1 1 34839
90% 1 1 33307
70% 1 1 29698
50% 1 1 25568
40% 1 1 22665
30% 1 1 19306
Entity #2: Chains: B - DNA (5'-D(*CP*TP*GP*TP*GP*AP*AP*CP*CP*CP*GP*CP*CP*AP*AP*C)-3') dna, length: 16 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - DNA (5'-D(*AP*GP*GP*TP*TP*GP*GP*CP*GP*GP*GP*TP*TP*CP*AP*C)-3') dna, length: 16 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.