Sequence Similarity Clusters for the Entities in PDB 3W6K

Entity #1 | Chains: A,D
ScpA protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B,C,E,F
ScpB protein, length: 92 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 23571
95 % 1 1 20091 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 1 1 19530
70 % 1 1 17988
50 % 1 1 15637
40 % 1 1 13950
30 % 1 1 11937

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.