Sequence Similarity Clusters for the Entities in PDB 3W4U

Entity #1 | Chains: A,C,E
Hemoglobin subunit zeta protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15524
95 % 1 2 14452 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 1 2 14173
70 % 1 2 13073
50 % 320 754 4
40 % 324 759 7
30 % 753 1293 6
Entity #2 | Chains: B,D,F
Hemoglobin subunit beta protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 9 2558
95 % 116 250 20 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 119 255 21
70 % 145 346 14
50 % 321 754 4
40 % 325 759 7
30 % 754 1293 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures