Sequence Similarity Clusters for the Entities in PDB 3W4U

Entity #1 | Chains: A,C,E
Hemoglobin subunit zeta protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 15709
95 % 1 2 14710 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 1 2 14437
70 % 1 2 13545
50 % 316 744 4
40 % 320 749 8
30 % 716 1198 8
Entity #2 | Chains: B,D,F
Hemoglobin subunit beta protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 2554
95 % 113 245 18 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 116 250 19
70 % 143 341 12
50 % 317 744 4
40 % 321 749 8
30 % 717 1198 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.