Sequence Similarity Clusters for the Entities in PDB 3W3D

Entity #1 | Chains: A
Actin, gamma-enteric smooth muscle protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53811
95 % 29 179 15 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.0
PDBFlex
90 % 29 184 16
70 % 31 189 23
50 % 31 192 36
40 % 31 211 41
30 % 31 231 54
Entity #2 | Chains: B
Deoxyribonuclease-1 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 10 5692
95 % 3 11 5710 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 3 11 5723
70 % 3 12 5023
50 % 3 12 4805
40 % 3 12 4548
30 % 3 12 4170

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.