Sequence Similarity Clusters for the Entities in PDB 3W3D

Entity #1 | Chains: A
Actin, gamma-enteric smooth muscle protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47856
95 % 29 172 13
90 % 29 177 13
70 % 30 180 21
50 % 30 182 25
40 % 30 201 31
30 % 30 221 47
Entity #2 | Chains: B
Deoxyribonuclease-1 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 10 4912
95 % 3 11 4989
90 % 3 11 5007
70 % 3 12 4400
50 % 3 12 4255
40 % 3 12 4046
30 % 3 12 3725

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.