Sequence Similarity Clusters for the Entities in PDB 3W3D

Entity #1 | Chains: A
Actin, gamma-enteric smooth muscle protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49953
95 % 29 174 13
90 % 29 179 14
70 % 30 182 23
50 % 30 184 36
40 % 30 203 35
30 % 30 223 51
Entity #2 | Chains: B
Deoxyribonuclease-1 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 10 5194
95 % 3 11 5215
90 % 3 11 5235
70 % 3 12 4611
50 % 3 12 4441
40 % 3 12 4224
30 % 3 12 3879

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.