Sequence Similarity Clusters for the Entities in PDB 3W3D

Entity #1 | Chains: A
Actin, gamma-enteric smooth muscle protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45773
95 % 29 169 11
90 % 29 173 12
70 % 30 176 20
50 % 30 178 22
40 % 30 197 29
30 % 30 217 38
Entity #2 | Chains: B
Deoxyribonuclease-1 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 10 4673
95 % 3 11 4772
90 % 3 11 4799
70 % 3 12 4215
50 % 3 12 4070
40 % 3 12 3863
30 % 3 12 3562

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.