Sequence Similarity Clusters for the Entities in PDB 3W3D

Entity #1 | Chains: A
Actin, gamma-enteric smooth muscle protein, length: 374 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48550
95 % 29 173 13
90 % 29 178 13
70 % 30 181 21
50 % 30 183 25
40 % 30 202 32
30 % 30 222 49
Entity #2 | Chains: B
Deoxyribonuclease-1 protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 10 5003
95 % 3 11 5064
90 % 3 11 5085
70 % 3 12 4462
50 % 3 12 4312
40 % 3 12 4099
30 % 3 12 3768

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.