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Crystal structure of VirB core domain complexed with the cis-acting site upstream icsb promoter
Sequence Clustering and Redundancy Reduction Results
3W3C
Cluster # 11073 Members. Sequence cutoff: 30% Cluster size: 3 sequences
Rank   PDB id Entity id Chains Description Details Taxonomy EC Number
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1 3VWB 1 A Virulence regulon transcriptional activator virB UNP residues 129-250 42897  
2 3W3C 1 A Virulence regulon transcriptional activator VirB UNP residues 129-250 42897  
3 3W2A 1 A Virulence regulon transcriptional activator VirB core domain, UNP residues 129-250 42897  
 
Sequence Clusters for the Sequence Entities in PDB 3W3C
Entity #1: Chains: A - Virulence regulon transcriptional activator VirB protein, length: 143 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 3 21827
95% 2 3 18296
90% 2 3 17751
70% 2 3 16353
50% 2 3 14343
40% 2 3 12867
30% 2 3 11073
Entity #2: Chains: B - DNA (26-MER) dna, length: 26 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - DNA (26-MER) dna, length: 26 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.