Sequence Similarity Clusters for the Entities in PDB 3W3C

Entity #1 | Chains: A
Virulence regulon transcriptional activator VirB protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28653
95 % 2 3 23806 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 1.0
PDBFlex
90 % 2 3 23029
70 % 2 3 20991
50 % 2 3 18177
40 % 2 3 16197
30 % 2 3 13851
Entity #2 | Chains: B
DNA (26-MER) dna, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
DNA (26-MER) dna, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.