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An Information Portal to 105906 Biological Macromolecular Structures

Structual basis for the recognition of Ubc13 by the Shigella flexneri effector OspI
Sequence Clustering and Redundancy Reduction Results
3W31
Sequence Clusters for the Sequence Entities in PDB 3W31
Entity #1: Chains: A - ORF169b protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 15944
95% 4 4 11042
90% 4 4 10878
70% 4 4 10282
50% 4 4 9244
40% 4 4 8428
30% 4 4 7401
Entity #2: Chains: B - Ubiquitin-conjugating enzyme E2 N protein, length: 155 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 11 780
95% 11 14 1018
90% 11 14 1035
70% 15 18 919
50% 49 60 313
40% 104 125 161
30% 111 133 176
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.