Sequence Similarity Clusters for the Entities in PDB 3W31

Entity #1 | Chains: A
ORF169b protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 16487
95 % 5 5 13332 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 5 5 13099
70 % 5 5 12334
50 % 5 5 10980
40 % 5 5 9888
30 % 5 5 8467
Entity #2 | Chains: B
Ubiquitin-conjugating enzyme E2 N protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 19 918
95 % 18 26 893 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.0
PDBFlex
90 % 18 26 927
70 % 23 31 871
50 % 78 95 331
40 % 152 183 180
30 % 164 197 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures