Sequence Similarity Clusters for the Entities in PDB 3W31

Entity #1 | Chains: A
ORF169b protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 21072
95 % 5 5 12394 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 5 5 12202
70 % 5 5 11498
50 % 5 5 10279
40 % 5 5 9321
30 % 5 5 8129
Entity #2 | Chains: B
Ubiquitin-conjugating enzyme E2 N protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 14 984
95 % 17 22 948 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.0
PDBFlex
90 % 17 22 984
70 % 22 27 912
50 % 75 89 308
40 % 150 177 166
30 % 157 185 176

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.