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An Information Portal to 107620 Biological Macromolecular Structures

Structual basis for the recognition of Ubc13 by the Shigella flexneri effector OspI
Sequence Clustering and Redundancy Reduction Results
3W31
Sequence Clusters for the Sequence Entities in PDB 3W31
Entity #1: Chains: A - ORF169b protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 16257
95% 4 4 11212
90% 4 4 11042
70% 4 4 10433
50% 4 4 9373
40% 4 4 8544
30% 4 4 7490
Entity #2: Chains: B - Ubiquitin-conjugating enzyme E2 N protein, length: 155 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 11 793
95% 11 14 1038
90% 11 14 1054
70% 15 18 942
50% 49 60 325
40% 104 125 173
30% 111 133 185
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.