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Structual basis for the recognition of Ubc13 by the Shigella flexneri effector OspI
Sequence Clustering and Redundancy Reduction Results
3W31
Sequence Clusters for the Sequence Entities in PDB 3W31
Entity #1: Chains: A - ORF169b protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 16139
95% 4 4 11142
90% 4 4 10972
70% 4 4 10371
50% 4 4 9317
40% 4 4 8497
30% 4 4 7454
Entity #2: Chains: B - Ubiquitin-conjugating enzyme E2 N protein, length: 155 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 11 789
95% 11 14 1032
90% 11 14 1049
70% 15 18 932
50% 49 60 320
40% 104 125 172
30% 111 133 184
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.