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An Information Portal to 105339 Biological Macromolecular Structures

Structual basis for the recognition of Ubc13 by the Shigella flexneri effector OspI
Sequence Clustering and Redundancy Reduction Results
3W31
Sequence Clusters for the Sequence Entities in PDB 3W31
Entity #1: Chains: A - ORF169b protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 15854
95% 4 4 10980
90% 4 4 10816
70% 4 4 10227
50% 4 4 9199
40% 4 4 8382
30% 4 4 7367
Entity #2: Chains: B - Ubiquitin-conjugating enzyme E2 N protein, length: 155 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 8 11 777
95% 11 14 1013
90% 11 14 1030
70% 15 18 911
50% 48 59 317
40% 103 124 159
30% 110 132 177
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.