Sequence Similarity Clusters for the Entities in PDB 3W31

Entity #1 | Chains: A
ORF169b protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 16039
95 % 5 5 13019 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 5 5 12797
70 % 5 5 12034
50 % 5 5 10734
40 % 5 5 9662
30 % 5 5 8275
Entity #2 | Chains: B
Ubiquitin-conjugating enzyme E2 N protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 19 898
95 % 18 26 865 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.0
PDBFlex
90 % 18 26 897
70 % 23 31 840
50 % 77 94 319
40 % 150 179 181
30 % 162 193 185

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures