Sequence Similarity Clusters for the Entities in PDB 3W31

Entity #1 | Chains: A
ORF169b protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 21610
95 % 5 5 12656 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 5 5 12461
70 % 5 5 11743
50 % 5 5 10496
40 % 5 5 9516
30 % 5 5 8297
Entity #2 | Chains: B
Ubiquitin-conjugating enzyme E2 N protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 14 1016
95 % 17 25 881 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.0
PDBFlex
90 % 17 25 912
70 % 22 30 831
50 % 76 93 304
40 % 151 181 170
30 % 160 191 170

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures