Sequence Similarity Clusters for the Entities in PDB 3W31

Entity #1 | Chains: A
ORF169b protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 20397
95 % 5 5 11999 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 5 5 11815
70 % 5 5 11124
50 % 5 5 9974
40 % 5 5 9045
30 % 5 5 7879
Entity #2 | Chains: B
Ubiquitin-conjugating enzyme E2 N protein, length: 155 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 14 947
95 % 17 22 927
90 % 17 22 961
70 % 21 26 899
50 % 72 86 304
40 % 146 172 170
30 % 153 180 178

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.