Sequence Similarity Clusters for the Entities in PDB 3W1J

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
L-seryl-tRNA(Sec) selenium transferase protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 2472
95 % 3 3 2831 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.8
PDBFlex
90 % 3 3 2878
70 % 3 3 2853
50 % 3 3 2815
40 % 3 3 2763
30 % 3 3 2594

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3W1I 1 A, B, C, D, E, F, G, H, I, J L-seryl-tRNA(Sec) selenium transferase the core and C-terminal domains, UNP residues 62-452 63363 2.9.1.1 | Details
2 3W1J 1 A, B, C, D, E, F, G, H, I, J L-seryl-tRNA(Sec) selenium transferase the core and C-terminal domains, UNP residues 62-452 63363 2.9.1.1 | Details