Sequence Similarity Clusters for the Entities in PDB 3W1J

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J
L-seryl-tRNA(Sec) selenium transferase protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 2477
95 % 3 3 2836 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.8
PDBFlex
90 % 3 3 2883
70 % 3 3 2861
50 % 3 3 2822
40 % 3 3 2769
30 % 3 3 2599

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures