Sequence Similarity Clusters for the Entities in PDB 3W1H

Entity #1 | Chains: A,B,C,D,E
L-seryl-tRNA(Sec) selenium transferase protein, length: 452 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 6260
95 % 2 3 5610 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.5
PDBFlex
90 % 2 3 5634
70 % 2 3 5539
50 % 2 3 5255
40 % 2 3 4956
30 % 2 3 4523

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures