Sequence Similarity Clusters for the Entities in PDB 3W1H

Entity #1 | Chains: A,B,C,D,E
L-seryl-tRNA(Sec) selenium transferase protein, length: 452 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 6019
95 % 2 3 5408 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.5
PDBFlex
90 % 2 3 5426
70 % 2 3 5349
50 % 2 3 5081
40 % 2 3 4800
30 % 2 3 4380

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.