Sequence Similarity Clusters for the Entities in PDB 3W1H

Entity #1 | Chains: A,B,C,D,E
L-seryl-tRNA(Sec) selenium transferase protein, length: 452 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 7493
95 % 2 3 6221 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.5
PDBFlex
90 % 2 3 6217
70 % 2 3 6056
50 % 2 3 5671
40 % 2 3 5183
30 % 2 3 4599

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures