Sequence Similarity Clusters for the Entities in PDB 3W13

Entity #1 | Chains: E
Insulin receptor domains L1-CR protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10028
95 % 6 7 10069 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 6 7 9958
70 % 6 7 9459
50 % 6 7 8581
40 % 6 7 7864
30 % 6 7 6942
Entity #2 | Chains: C
monoclonal antibody fab 83-7 fragment - heavy chain protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 15490
95 % 4 5 14521 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 4 5 14248
70 % 28 36 1225
50 % 479 540 8
40 % 778 887 5
30 % 863 1013 7
Entity #3 | Chains: D
monoclonal antibody fab 83-7 fragment - light chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 15519
95 % 4 5 14550 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 4 6 12649
70 % 156 188 71
50 % 255 302 22
40 % 779 887 5
30 % 864 1013 7
Entity #4 | Chains: A
Insulin A chain protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 182 242 4
95 % 214 284 6 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.9
PDBFlex
90 % 215 287 7
70 % 215 287 11
50 % 215 287 15
40 % 215 287 23
30 % 215 287 41
Entity #5 | Chains: B
Insulin B chain protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 184 213 7
95 % 213 280 8
90 % 216 286 9
70 % 216 289 12
50 % 216 289 16
40 % 216 289 25
30 % 216 289 43
Entity #6 | Chains: F
Insulin receptor alphact peptide protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73376
95 % 1 1 51234
90 % 1 1 48640
70 % 1 1 42737
50 % 1 1 36583
40 % 1 1 32315
30 % 1 1 27461

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.