Sequence Similarity Clusters for the Entities in PDB 3W13

Entity #1 | Chains: E
Insulin receptor domains L1-CR protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10150
95 % 6 7 10210 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 6 7 10098
70 % 6 7 9608
50 % 6 7 8700
40 % 6 7 7967
30 % 6 7 7038
Entity #2 | Chains: C
monoclonal antibody fab 83-7 fragment - heavy chain protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 15712
95 % 4 5 14736 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 4 5 14468
70 % 28 36 1238
50 % 503 566 7
40 % 803 916 5
30 % 888 1042 7
Entity #3 | Chains: D
monoclonal antibody fab 83-7 fragment - light chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 15742
95 % 4 5 14767 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 4 6 12830
70 % 157 191 72
50 % 256 305 21
40 % 804 916 5
30 % 889 1042 7
Entity #4 | Chains: A
Insulin A chain protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 183 243 5
95 % 215 285 7 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 216 288 8
70 % 216 288 11
50 % 216 288 15
40 % 216 288 24
30 % 216 288 41
Entity #5 | Chains: B
Insulin B chain protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 185 214 7
95 % 214 281 8
90 % 217 287 9
70 % 217 290 12
50 % 217 290 16
40 % 217 290 26
30 % 217 290 43
Entity #6 | Chains: F
Insulin receptor alphact peptide protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74460
95 % 1 1 52053
90 % 1 1 49404
70 % 1 1 43284
50 % 1 1 36964
40 % 1 1 32634
30 % 1 1 27729

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.