Sequence Similarity Clusters for the Entities in PDB 3W12

Entity #1 | Chains: E
Insulin receptor domains L1-CR protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 12110
95 % 7 7 11672 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 7 7 11506
70 % 7 7 10883
50 % 7 7 9789
40 % 7 7 8848
30 % 7 7 7472
Entity #2 | Chains: C
monoclonal antibody fab 83-7 fragment - heavy chain protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 17615
95 % 5 5 16338 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 5 15968
70 % 65 76 570
50 % 569 646 6
40 % 5692 6051 1
30 % 7040 7514 1
Entity #3 | Chains: D
monoclonal antibody fab 83-7 fragment - light chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 17392
95 % 5 5 16129 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 7 11536
70 % 178 218 70
50 % 271 331 19
40 % 315 375 27
30 % 7041 7514 1
Entity #4 | Chains: A
Insulin A chain protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 223 290 6
95 % 224 296 9 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 225 298 10
70 % 229 304 12
50 % 229 304 17
40 % 229 304 31
30 % 229 304 50
Entity #5 | Chains: B
Insulin B chain protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 217 266 7
95 % 230 303 8
90 % 230 303 9
70 % 230 306 13
50 % 230 306 18
40 % 230 306 32
30 % 230 306 52
Entity #6 | Chains: F
Insulin receptor alpha-CT peptide protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5J3H 3 D mAb 83-7 Fab light chain 10090
2 4OGA 4 D monoclonal antibody fab 83-7 fragment - light chain 10090
3 3W11 4 D monoclonal antibody fab 83-7 fragment - light chain 10090
4 3W13 3 D monoclonal antibody fab 83-7 fragment - light chain 10090
5 3W12 3 D monoclonal antibody fab 83-7 fragment - light chain 10090