Sequence Similarity Clusters for the Entities in PDB 3W12

Entity #1 | Chains: E
Insulin receptor domains L1-CR protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 11636
95 % 7 7 11240 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 7 7 11094
70 % 7 7 10473
50 % 7 7 9439
40 % 7 7 8545
30 % 7 7 7240
Entity #2 | Chains: C
monoclonal antibody fab 83-7 fragment - heavy chain protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16898
95 % 5 5 15684 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 5 15355
70 % 65 76 543
50 % 542 609 6
40 % 5442 5756 1
30 % 6754 7175 1
Entity #3 | Chains: D
monoclonal antibody fab 83-7 fragment - light chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16672
95 % 5 5 15479 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 7 11123
70 % 178 215 66
50 % 265 317 23
40 % 309 361 27
30 % 6755 7175 1
Entity #4 | Chains: A
Insulin A chain protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 222 289 6
95 % 223 295 8 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 224 297 9
70 % 228 303 11
50 % 228 303 16
40 % 228 303 29
30 % 228 303 45
Entity #5 | Chains: B
Insulin B chain protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 216 265 7
95 % 229 302 7
90 % 229 302 8
70 % 229 305 12
50 % 229 305 17
40 % 229 305 31
30 % 229 305 47
Entity #6 | Chains: F
Insulin receptor alpha-CT peptide protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5J3H 3 D mAb 83-7 Fab light chain 10090
2 4OGA 4 D monoclonal antibody fab 83-7 fragment - light chain 10090
3 3W11 4 D monoclonal antibody fab 83-7 fragment - light chain 10090
4 3W13 3 D monoclonal antibody fab 83-7 fragment - light chain 10090
5 3W12 3 D monoclonal antibody fab 83-7 fragment - light chain 10090