Sequence Similarity Clusters for the Entities in PDB 3W12

Entity #1 | Chains: E
Insulin receptor domains L1-CR protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 10483
95 % 7 7 10511 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 7 7 10386
70 % 7 7 9868
50 % 7 7 8938
40 % 7 7 8187
30 % 7 7 7222
Entity #2 | Chains: C
monoclonal antibody fab 83-7 fragment - heavy chain protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16236
95 % 5 5 15165 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 5 14895
70 % 29 36 1276
50 % 529 594 7
40 % 833 948 5
30 % 921 1077 7
Entity #3 | Chains: D
monoclonal antibody fab 83-7 fragment - light chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16266
95 % 5 5 15198 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 7 10848
70 % 158 192 74
50 % 260 309 23
40 % 834 948 5
30 % 922 1077 7
Entity #4 | Chains: A
Insulin A chain protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 194 254 4
95 % 226 296 7 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 228 300 8
70 % 228 300 11
50 % 228 300 16
40 % 228 300 25
30 % 228 300 44
Entity #5 | Chains: B
Insulin B chain protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 197 226 7
95 % 226 293 8
90 % 229 299 9
70 % 229 302 12
50 % 229 302 17
40 % 229 302 26
30 % 229 302 45
Entity #6 | Chains: F
Insulin receptor alpha-CT peptide protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures