Sequence Similarity Clusters for the Entities in PDB 3W12

Entity #1 | Chains: E
Insulin receptor domains L1-CR protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 10662
95 % 7 7 10673 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 7 7 10547
70 % 7 7 10015
50 % 7 7 9068
40 % 7 7 8298
30 % 7 7 7315
Entity #2 | Chains: C
monoclonal antibody fab 83-7 fragment - heavy chain protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16488
95 % 5 5 15373 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 5 15093
70 % 65 76 538
50 % 533 599 6
40 % 839 956 5
30 % 927 1085 7
Entity #3 | Chains: D
monoclonal antibody fab 83-7 fragment - light chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 16519
95 % 5 5 15406 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 5 7 11015
70 % 159 193 75
50 % 262 312 23
40 % 840 956 5
30 % 928 1085 7
Entity #4 | Chains: A
Insulin A chain protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 194 257 4
95 % 226 299 7 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 228 303 7
70 % 228 303 11
50 % 228 303 16
40 % 228 303 27
30 % 228 303 45
Entity #5 | Chains: B
Insulin B chain protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 197 229 6
95 % 226 296 8
90 % 229 302 9
70 % 229 305 12
50 % 229 305 17
40 % 229 305 28
30 % 229 305 46
Entity #6 | Chains: F
Insulin receptor alpha-CT peptide protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures