Sequence Similarity Clusters for the Entities in PDB 3W11

Entity #1 | Chains: A
Insulin A chain protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 181 242 4
95 % 213 284 6 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.9
PDBFlex
90 % 214 287 7
70 % 214 287 11
50 % 214 287 15
40 % 214 287 23
30 % 214 287 41
Entity #2 | Chains: B
Insulin B chain protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 183 213 7
95 % 212 280 8
90 % 215 286 9
70 % 215 289 12
50 % 215 289 16
40 % 215 289 25
30 % 215 289 43
Entity #3 | Chains: C
monoclonal antibody fab 83-7 fragment - heavy chain protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 15458
95 % 3 5 14494 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 5 14223
70 % 27 36 1224
50 % 474 540 8
40 % 771 887 5
30 % 856 1013 7
Entity #4 | Chains: D
monoclonal antibody fab 83-7 fragment - light chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 15487
95 % 3 5 14523 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 6 12628
70 % 155 188 71
50 % 253 302 22
40 % 772 887 5
30 % 857 1013 7
Entity #5 | Chains: E
Insulin receptor domains L1-CR protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10012
95 % 5 7 10054 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 7 9945
70 % 5 7 9447
50 % 5 7 8571
40 % 5 7 7853
30 % 5 7 6933
Entity #6 | Chains: F
Insulin receptor alpha-CT peptide protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.