Sequence Similarity Clusters for the Entities in PDB 3W11

Entity #1 | Chains: A
Insulin A chain protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 182 243 5
95 % 214 285 7 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 215 288 8
70 % 215 288 11
50 % 215 288 15
40 % 215 288 24
30 % 215 288 41
Entity #2 | Chains: B
Insulin B chain protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 184 214 7
95 % 213 281 8
90 % 216 287 9
70 % 216 290 12
50 % 216 290 16
40 % 216 290 26
30 % 216 290 43
Entity #3 | Chains: C
monoclonal antibody fab 83-7 fragment - heavy chain protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 15712
95 % 3 5 14736 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 5 14468
70 % 27 36 1238
50 % 498 566 7
40 % 796 916 5
30 % 881 1042 7
Entity #4 | Chains: D
monoclonal antibody fab 83-7 fragment - light chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 15742
95 % 3 5 14767 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 6 12830
70 % 156 191 72
50 % 254 305 21
40 % 797 916 5
30 % 882 1042 7
Entity #5 | Chains: E
Insulin receptor domains L1-CR protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10150
95 % 5 7 10210 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 7 10098
70 % 5 7 9608
50 % 5 7 8700
40 % 5 7 7967
30 % 5 7 7038
Entity #6 | Chains: F
Insulin receptor alpha-CT peptide protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.