Sequence Similarity Clusters for the Entities in PDB 3W11

Entity #1 | Chains: A
Insulin A chain protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 182 243 5
95 % 214 285 7 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 216 289 8
70 % 216 289 12
50 % 216 289 17
40 % 216 289 29
30 % 216 289 47
Entity #2 | Chains: B
Insulin B chain protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 185 215 7
95 % 214 282 8
90 % 217 288 9
70 % 217 291 13
50 % 217 291 18
40 % 217 291 30
30 % 217 291 48
Entity #3 | Chains: C
monoclonal antibody fab 83-7 fragment - heavy chain protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 16106
95 % 3 5 15056 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 5 14791
70 % 27 36 1263
50 % 515 583 7
40 % 816 936 5
30 % 904 1065 7
Entity #4 | Chains: D
monoclonal antibody fab 83-7 fragment - light chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 16136
95 % 3 5 15089 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 6 13114
70 % 156 191 73
50 % 257 308 22
40 % 817 936 5
30 % 905 1065 7
Entity #5 | Chains: E
Insulin receptor domains L1-CR protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10397
95 % 5 7 10426 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 7 10301
70 % 5 7 9790
50 % 5 7 8873
40 % 5 7 8123
30 % 5 7 7168
Entity #6 | Chains: F
Insulin receptor alpha-CT peptide protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures