Sequence Similarity Clusters for the Entities in PDB 3W11

Entity #1 | Chains: A
Insulin A chain protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 221 290 6
95 % 222 296 8 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 223 298 10
70 % 227 304 12
50 % 227 304 16
40 % 227 304 29
30 % 227 304 46
Entity #2 | Chains: B
Insulin B chain protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 215 266 7
95 % 228 303 7
90 % 228 303 8
70 % 228 306 13
50 % 228 306 17
40 % 228 306 30
30 % 228 306 48
Entity #3 | Chains: C
monoclonal antibody fab 83-7 fragment - heavy chain protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 17001
95 % 3 5 15775 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 5 15439
70 % 63 76 543
50 % 540 613 6
40 % 5431 5834 1
30 % 6750 7269 1
Entity #4 | Chains: D
monoclonal antibody fab 83-7 fragment - light chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 16776
95 % 3 5 15575 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 7 11186
70 % 176 215 66
50 % 264 319 21
40 % 308 363 27
30 % 6751 7269 1
Entity #5 | Chains: E
Insulin receptor domains L1-CR protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 11704
95 % 5 7 11302 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 7 11156
70 % 5 7 10527
50 % 5 7 9488
40 % 5 7 8586
30 % 5 7 7269
Entity #6 | Chains: F
Insulin receptor alpha-CT peptide protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures