Sequence Similarity Clusters for the Entities in PDB 3W11

Entity #1 | Chains: A
Insulin A chain protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 184 246 5
95 % 216 288 7 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 218 292 8
70 % 218 292 13
50 % 218 292 17
40 % 218 292 28
30 % 218 292 47
Entity #2 | Chains: B
Insulin B chain protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 187 218 7
95 % 216 285 9
90 % 219 291 9
70 % 219 294 14
50 % 219 294 18
40 % 219 294 30
30 % 219 294 48
Entity #3 | Chains: C
monoclonal antibody fab 83-7 fragment - heavy chain protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 16204
95 % 3 5 15138 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 5 14868
70 % 27 36 1274
50 % 521 591 7
40 % 822 945 5
30 % 910 1074 7
Entity #4 | Chains: D
monoclonal antibody fab 83-7 fragment - light chain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 16234
95 % 3 5 15171 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 3 7 10817
70 % 156 192 73
50 % 257 309 23
40 % 823 945 5
30 % 911 1074 7
Entity #5 | Chains: E
Insulin receptor domains L1-CR protein, length: 310 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 10458
95 % 5 7 10482 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 7 10357
70 % 5 7 9844
50 % 5 7 8918
40 % 5 7 8165
30 % 5 7 7203
Entity #6 | Chains: F
Insulin receptor alpha-CT peptide protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures