Sequence Similarity Clusters for the Entities in PDB 3VYY

Entity #1 | Chains: A,B
ATP-dependent RNA helicase A protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48546
95 % 1 1 36206 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 34563
70 % 1 1 30707
50 % 1 1 26221
40 % 1 1 23114
30 % 1 1 19561
Entity #2 | Chains: C,D,E,F,G
RNA (5'-R(*GP*CP*GP*CP*GP*CP*GP*CP*GP*C)-3') rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures