Sequence Similarity Clusters for the Entities in PDB 3VYI

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
Voltage-gated hydrogen channel 1 protein, length: 51 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 5545
95 % 1 1 6181 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.6
PDBFlex
90 % 1 1 6176
70 % 5 5 2179
50 % 5 5 2159
40 % 5 5 2153
30 % 5 5 2063

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.