Sequence Similarity Clusters for the Entities in PDB 3VX8

Entity #1 | Chains: A,D
Ubiquitin-like modifier-activating enzyme atg7 protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37057
95 % 1 1 29168
90 % 1 1 28147
70 % 1 1 25395
50 % 1 1 21788
40 % 1 1 19239
30 % 1 1 16390
Entity #2 | Chains: B,C
Autophagy-related protein 3 protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38170
95 % 1 1 29805 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 28749
70 % 1 1 25922
50 % 1 1 22193
40 % 1 1 19571
30 % 3 3 9450

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures