Sequence Similarity Clusters for the Entities in PDB 3VX8

Entity #1 | Chains: A,D
Ubiquitin-like modifier-activating enzyme atg7 protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30858
95 % 1 1 26829 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 25861
70 % 1 1 23403
50 % 1 1 20080
40 % 1 1 17718
30 % 1 1 14856
Entity #2 | Chains: B,C
Autophagy-related protein 3 protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30859
95 % 1 1 26830 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 25862
70 % 1 1 23404
50 % 1 1 20081
40 % 1 1 17719
30 % 3 3 8958

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures