Sequence Similarity Clusters for the Entities in PDB 3VX8

Entity #1 | Chains: A,D
Ubiquitin-like modifier-activating enzyme atg7 protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36565
95 % 1 1 28788
90 % 1 1 27785
70 % 1 1 25082
50 % 1 1 21537
40 % 1 1 19022
30 % 1 1 16199
Entity #2 | Chains: B,C
Autophagy-related protein 3 protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37663
95 % 1 1 29414 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 28376
70 % 1 1 25600
50 % 1 1 21938
40 % 1 1 19350
30 % 3 3 9324

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures