Sequence Similarity Clusters for the Entities in PDB 3VW3

Entity #1 | Chains: L
Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain) protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54187
95 % 119 137 142
90 % 123 142 147
70 % 1082 1639 3
50 % 2612 3985 1
40 % 2613 3986 1
30 % 3039 4715 1
Entity #2 | Chains: H
Anti-(6-4) photoproduct antibody 64M-5 Fab (heavy chain) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53881
95 % 1 1 37866
90 % 5 5 12613
70 % 1266 1932 1
50 % 2613 3985 1
40 % 2614 3986 1
30 % 3040 4715 1
Entity #3 | Chains: A
DNA (5'-D(*GP*CP*GP*AP*GP*TP*GP*AP*(64T)P*(5PY)P*AP*TP*GP*GP*AP*CP*GP*G)-3') dna, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: B
DNA (5'-D(*CP*CP*CP*GP*TP*CP*CP*AP*TP*AP*AP*TP*CP*AP*CP*TP*CP*G)-3') dna, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.