Sequence Similarity Clusters for the Entities in PDB 3VVW

Entity #1 | Chains: A
Calcium-binding and coiled-coil domain-containing protein 2 protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 45813
95 % 2 2 34310 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 2.1
PDBFlex
90 % 2 2 32795
70 % 2 2 29213
50 % 2 2 24942
40 % 3 3 13726
30 % 3 3 11745
Entity #2 | Chains: B
Microtubule-associated proteins 1A/1B light chain 3C protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 5826
95 % 3 4 6484 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 4 6466
70 % 3 4 6314
50 % 29 39 732
40 % 47 70 434
30 % 48 71 429

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.