Sequence Similarity Clusters for the Entities in PDB 3VVW

Entity #1 | Chains: A
Calcium-binding and coiled-coil domain-containing protein 2 protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 46715
95 % 2 2 34938 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 2.1
PDBFlex
90 % 2 2 33363
70 % 2 2 29683
50 % 2 2 25329
40 % 3 3 13963
30 % 3 3 11943
Entity #2 | Chains: B
Microtubule-associated proteins 1A/1B light chain 3C protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 5948
95 % 3 4 6599 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 4 6583
70 % 3 4 6424
50 % 29 39 747
40 % 47 70 450
30 % 48 71 443

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures