Sequence Similarity Clusters for the Entities in PDB 3VUY

Entity #1 | Chains: A,B,C
Polyubiquitin-C protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 63 232 6
95 % 79 281 10
90 % 83 294 10
70 % 88 315 9
50 % 93 335 14
40 % 102 356 16
30 % 244 829 10
Entity #2 | Chains: D,E,F
Tumor necrosis factor alpha-induced protein 3 protein, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 6381
95 % 3 3 6931
90 % 3 3 6901
70 % 3 3 6685
50 % 3 3 6221
40 % 3 3 5812
30 % 3 3 5203

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.