Sequence Similarity Clusters for the Entities in PDB 3VUY

Entity #1 | Chains: A,B,C
Polyubiquitin-C protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 84 279 5
95 % 102 335 5
90 % 109 357 6
70 % 112 372 8
50 % 117 393 12
40 % 126 415 15
30 % 284 914 9
Entity #2 | Chains: D,E,F
Tumor necrosis factor alpha-induced protein 3 protein, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 6978
95 % 3 3 7507
90 % 3 3 7477
70 % 3 3 7231
50 % 3 3 6690
40 % 3 3 6222
30 % 3 3 5550

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.