Sequence Similarity Clusters for the Entities in PDB 3VUX

Entity #1 | Chains: A,B,C
Polyubiquitin-C protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 241 5
95 % 28 293 9
90 % 30 306 10
70 % 32 328 8
50 % 33 348 13
40 % 34 369 16
30 % 112 847 9
Entity #2 | Chains: E,F,G
Tumor necrosis factor alpha-induced protein 3 protein, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 6482
95 % 1 3 7051
90 % 1 3 7021
70 % 1 3 6797
50 % 1 3 6317
40 % 1 3 5903
30 % 1 3 5282

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.