Sequence Similarity Clusters for the Entities in PDB 3VUX

Entity #1 | Chains: A,B,C
Polyubiquitin-C protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 239 5
95 % 28 291 9
90 % 30 304 10
70 % 32 325 8
50 % 33 345 14
40 % 34 366 16
30 % 112 840 10
Entity #2 | Chains: E,F,G
Tumor necrosis factor alpha-induced protein 3 protein, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 6447
95 % 1 3 7005
90 % 1 3 6976
70 % 1 3 6753
50 % 1 3 6274
40 % 1 3 5867
30 % 1 3 5247

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.