Sequence Similarity Clusters for the Entities in PDB 3VUW

Entity #1 | Chains: A,B,C
Polyubiquitin-C protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 49 252 6
95 % 61 305 8
90 % 65 318 6
70 % 69 340 8
50 % 73 361 13
40 % 75 383 17
30 % 201 868 9
Entity #2 | Chains: E,F,G
Tumor necrosis factor alpha-induced protein 3 protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 6672
95 % 2 3 7242
90 % 2 3 7216
70 % 2 3 6979
50 % 2 3 6482
40 % 2 3 6051
30 % 2 3 5408

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.