Sequence Similarity Clusters for the Entities in PDB 3VUW

Entity #1 | Chains: A,B,C
Polyubiquitin-C protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 48 249 5
95 % 60 301 8
90 % 64 314 6
70 % 68 336 8
50 % 72 356 13
40 % 74 378 17
30 % 196 858 9
Entity #2 | Chains: E,F,G
Tumor necrosis factor alpha-induced protein 3 protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 6593
95 % 2 3 7170
90 % 2 3 7142
70 % 2 3 6907
50 % 2 3 6412
40 % 2 3 5991
30 % 2 3 5358

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.