Sequence Similarity Clusters for the Entities in PDB 3VUW

Entity #1 | Chains: A,B,C
Polyubiquitin-C protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 45 225 6
95 % 57 272 10
90 % 61 285 11
70 % 65 300 16
50 % 69 320 15
40 % 71 341 18
30 % 191 807 10
Entity #2 | Chains: E,F,G
Tumor necrosis factor alpha-induced protein 3 protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 6240
95 % 2 3 6806
90 % 2 3 6778
70 % 2 3 6568
50 % 2 3 6107
40 % 2 3 5700
30 % 2 3 5102

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.