Sequence Similarity Clusters for the Entities in PDB 3VUM

Entity #1 | Chains: A
Mitogen-activated protein kinase 8 protein, length: 370 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 52184
95 % 14 30 1189 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.6
PDBFlex
90 % 46 78 400
70 % 49 81 423
50 % 365 454 54
40 % 367 461 64
30 % 2812 3744 2
Entity #2 | Chains: F
Peptide from C-Jun-amino-terminal kinase-interacting protein 1 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.