Sequence Similarity Clusters for the Entities in PDB 3VUI

Entity #1 | Chains: A
Mitogen-activated protein kinase 8 protein, length: 370 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49609
95 % 21 32 1250 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.7
PDBFlex
90 % 66 83 445
70 % 69 86 439
50 % 455 498 65
40 % 460 506 79
30 % 3924 4473 2
Entity #2 | Chains: F
Peptide from C-Jun-amino-terminal kinase-interacting protein 1 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures