Sequence Similarity Clusters for the Entities in PDB 3VUD

Entity #1 | Chains: A
Mitogen-activated protein kinase 8 protein, length: 370 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47617
95 % 26 30 1070
90 % 74 78 353
70 % 77 81 367
50 % 422 432 39
40 % 429 439 43
30 % 3211 3328 2
Entity #2 | Chains: F
Peptide from C-Jun-amino-terminal kinase-interacting protein 1 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.