Sequence Similarity Clusters for the Entities in PDB 3VUD

Entity #1 | Chains: A
Mitogen-activated protein kinase 8 protein, length: 370 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55801
95 % 28 32 1167
90 % 76 80 470
70 % 79 83 465
50 % 465 475 62
40 % 472 482 79
30 % 3936 4076 2
Entity #2 | Chains: F
Peptide from C-Jun-amino-terminal kinase-interacting protein 1 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures