Sequence Similarity Clusters for the Entities in PDB 3VTO

Entity #1 | Chains: A,B,C,P,Q,R
Protein gp45 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 12439
95 % 1 1 11920 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.7
PDBFlex
90 % 1 1 11749
70 % 1 1 11099
50 % 1 1 9942
40 % 1 1 8986
30 % 1 1 7743

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures