Sequence Similarity Clusters for the Entities in PDB 3VTO

Entity #1 | Chains: A,B,C,P,Q,R
Protein gp45 protein, length: 115 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 13727
95 % 1 1 13059 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.7
PDBFlex
90 % 1 1 12849
70 % 1 1 12100
50 % 1 1 10790
40 % 1 1 9789
30 % 1 1 8522

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.