Sequence Similarity Clusters for the Entities in PDB 3VSZ

Entity #1 | Chains: A,B,C,D,E,F
Ricin B lectin protein, length: 526 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 1425
95 % 2 5 1930 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.7
PDBFlex
90 % 2 5 1975
70 % 2 5 1989
50 % 2 5 2001
40 % 2 5 2001
30 % 2 5 1928

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures