Sequence Similarity Clusters for the Entities in PDB 3VSJ

Entity #1 | Chains: A,C
2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 8915
95 % 1 4 9185 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 4 9099
70 % 1 4 8736
50 % 1 4 7935
40 % 1 4 7308
30 % 1 4 6457
Entity #2 | Chains: B,D
2-amino-5-chlorophenol 1,6-dioxygenase beta subunit protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 8707
95 % 1 4 9014 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 4 8938
70 % 1 4 8594
50 % 1 4 7826
40 % 1 4 7213
30 % 1 4 6384

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures