Sequence Similarity Clusters for the Entities in PDB 3VSG

Entity #1 | Chains: A,C
2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit protein, length: 271 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 8538
95 % 2 4 8827 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 4 8754
70 % 2 4 8391
50 % 2 4 7618
40 % 2 4 7019
30 % 2 4 6205
Entity #2 | Chains: B,D
2-amino-5-chlorophenol 1,6-dioxygenase beta subunit protein, length: 312 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 8337
95 % 2 4 8658 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 4 8595
70 % 2 4 8252
50 % 2 4 7507
40 % 2 4 6923
30 % 2 4 6133

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.